PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008243254.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 230aa    MW: 25863.8 Da    PI: 5.8415
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008243254.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.4e-08116163455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L+ l+P +     k +  a +L  ++ Y++sLq
  XP_008243254.1 116 SHSLAERVRREKINERLRCLQNLVPGC----YKTMGMAVMLDVVISYVQSLQ 163
                     8*************************8....355888999999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-16110181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.99E-11110167No hitNo description
Gene3DG3DSA:4.10.280.108.8E-16112173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.212112162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-5116163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.3E-8118168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MELIDNLCEL ENLSANHHEI MALSNGMSFS DHQRQTNQLP LNFIQDNIQS FSHSDDPNHD  60
VLVAHSTSLT GDFAQESEKG KPLGGRKRKR NNIDKDGEKL KEVIHVRAKR GQATDSHSLA  120
ERVRREKINE RLRCLQNLVP GCYKTMGMAV MLDVVISYVQ SLQNQIEFLS MKLSAASVYY  180
DFNSPGVDAL DTMQQQGTNN AYGEVQEEMV RSEGYGGGLS NYNNNSTWPI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008243254.11e-174PREDICTED: transcription factor bHLH75-like isoform X4
SwissprotA4D9983e-51BH075_ARATH; Transcription factor bHLH75
TrEMBLM5XU041e-164M5XU04_PRUPE; Uncharacterized protein
STRINGVIT_01s0011g03720.t014e-76(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-51bHLH family protein